Hey there, sorry about the delayed replies, I lost my internet connection for a while lol. Anyways, here is an updated list of what I have from your wants. I might have some more that incoming from the mail but I'm not sure.
Base Set:
*H Chansey
Base Set 2:
*H Pidgeot
*H Wigglytuff
Jungle:
*H Vaporeon
*H Flareon
Fossil:
*H Articuno
*H Dragonite
*H Lapras
*H Hitmonlee
Gym Heroes:
* Rocket's Snorlax
^ Erica's Dratini
^ Misty's Poliwhirl
Gym Challenge:
^ Sabrina's Hypno
^ Koga's Kakuna
Neo Genesis:
* Donphan
^ Crocanaw(both)
^ Flaffy
^ Miltank
^ Phanpy
^ Piloswine
^ Quagsire
^ Quilava(46)
^ Xatu
o Chikorita(54)
o Cyndiquil(56)
o Ledyba
o Natu
o Sentret
o Shuckle
o Sudowoodo
o Sunkern
Neo Discovery
^ Corsola
Neo Revelation:
*H Misdreavus (not mint)
Neo Destiny:
o Larvitar
o Pineco